... unpack

You need gnu-tar or gnu-unzip to do this

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... gmake

We recommend to use GNU-make version 3.71 or later

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... nodes

This clearly will slow down calculation and should be used only for tests.

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... crd

The DCD file is an X-PLOR-compatible trajectory file which can be read by, e.g., Polygen Corp.'s Quanta molecular modeling software in combination with the PDB file information for the molecule (and a specification of the `type' of molecule as protein, nucleic acid, etc.) for visualizing and rendering the molecule at different points in the trajectory, and for making trajectory animations, etc.

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... sections

The usage of three sections does not have a very deep meaning, but is more or less a results of the program history.

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... system-call

This is done by calling the C-function system(char *string).

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... made

The command line may be left blank, but must not be deleted!

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... read

this is described in Section 2.3 of this manual.

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... forces

This is no limitation, as all atoms may be selected.

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... files

Generated by X-PLOR.

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... QUANTA

QUANTA is a visualization program for molecular modelling copyrighted by Polygen Corp.

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